Difference between revisions of "GSoC Network Analysis"

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Abstract: [http://socghop.appspot.com/student_project/show/google/gsoc2009/osgeo/t124023164520]
 
Abstract: [http://socghop.appspot.com/student_project/show/google/gsoc2009/osgeo/t124023164520]
  
== 1st week report ==
+
== report #4 ==
  
Hello list,
+
Dear all,
 +
 
 +
After a break I took because of my exams, I have started working on my GSoC project. I worked mostly on the (v.net.) flow module and related issues. I have extended the module so that it is possible to specify more than one point as the source and sink. Also, the module finds a minimum cut (edges with minimum capacities separating source(s) from sink(s)) in the network. Here is a picture of this: http://people.ksp.sk/~dano/grass/mfmult.png. Red crosses are sources and green ones are sinks (maybe, it is the other way round...) Blue edges correspond to small flow, green to medium flow and red to high flow. And the yellow edges are a minimum cut.
 +
 
 +
If the capacities of all edges are the same, minimum cut corresponds to the smallest number of edges separating two sets of vertices. By constructing an appropriate graph, it is also possible to find the smallest set of vertices separating sources and sinks. I have written code that does exactly this. In the next picture, orange points separate red points from green points: http://people.ksp.sk/~dano/grass/large.png. The next two pictures show details of the previous one: http://people.ksp.sk/~dano/grass/detail1.png, http://people.ksp.sk/~dano/grass/detail2.png. For the next week, I plan to turn this code into a module as the current version is more useful for debugging than using. Also, I will extend it to handle "node capacities". And I hope I will have time to start working on another new module.
  
I have agreed with my mentor, Wolf, to start working on my GSoC project bit earlier so that I can concentrate more on the exams later. Well, earlier means last Saturday and so this is my first week report. Just a short introduction: I am Daniel, 3rd year at Oxford doing Mathematics and Computer Science and some of you may remember me as the student working on GRASS v.generalize module two years ago. My project this year is about extending GRASS network/vector functionality by writing a couple of modules. I have created a wiki page: http://grass.osgeo.org/wiki/GSoC_Network_Analysis, which contains some useful information such as this email and a link to the abstract.
+
Daniel
  
Anyway, after doing boring, but essential, tasks such as downloading and compiling GRASS (I use 6.4 developer branch) I have done more interesting stuff. I wrote a module for computing weakly and strongly connected components. Using this module, I found errors in the standard North Caroline datset. At least, I think that these are errors. For example, if you zoom to [north: 232051.61663403  south: 230521.9965903  east: 640369.10332306  west: 638669.65919416] and let GRASS draw roadsmajor map for you, you get something like this: http://people.ksp.sk/~dano/grass/wcc1.jpg. (colours correspond to different components, which I obtained using my module). Or, the same map, but different location [north: 239329.55684214  south: 238882.80682937  east: 630466.77182694  west: 629997.32746966], and you have another disconnected lines: http://people.ksp.sk/~dano/grass/wcc2.jpg
+
== report #3 ==
  
Then, I have also written a module for computing bridges(edges whose removal disconnects the graph) in the network and found another, probably error. This time, it is in map "railroads". The location is [north: 195851.98992388  south: 187604.09950596  east: 669691.16599023  west: 663129.724274] and the picture is: http://people.ksp.sk/~dano/grass/railroads.jpg. Note that the lines are not connected at the point the red arrow points at. Also, it seems, but I am not completely sure, that there is something wrong with the red segment the green arrow points at. I think, that the segment is not topologically connected to the network at both ends, although, visually, it seems that it is.
+
Hi List,
  
Finally, here is a random picture from a module for computing bridges: http://people.ksp.sk/~dano/grass/bridges.jpg. (The data is from streets_wake map). The red edges are bridges. Strictly speaking, the blue edges are bridges as well, but they are not the type of bridge you usually look for/consider important. So I wrote another module that can identify such chains hanging on the network and remove them.  
+
This week, I implemented a module that computes the shortest path
 +
between all pairs of nodes in the graph. You can also specify which
 +
pairs you are interested in, so that the module does not have to
 +
produce the entire NxN matrix. Also, I started on network flow
 +
modules. So far, I have implemented a flow algorithm and a simple
 +
module that finds the maximum flow between two given vertices(Well,
 +
for debugging purposes, it can handle only the flow between nodes 215
 +
and 219, so far....) Anyway, here is couple of pictures:
 +
http://people.ksp.sk/~dano/grass/mfu.png,
 +
http://people.ksp.sk/~dano/grass/mfu2.png. One cross is source, the
 +
other one is sink. Blue edges correspond to low flow, green to medium
 +
and red to high flow. I used speed limit as edge capacities. Although
 +
it is not the case in the two pictures I posted, the forward and
 +
backward capacities of an edge can be different.
  
The code should appear shortly in GRASS addons repository.
+
For the next weeks, I plan to revise for my exams. As you may be
 +
aware, I have started two weeks earlier and so I will take a short
 +
break now.... Currently, I have no blocking issues.
  
That is for the last week. I am not currently stuck at anything and I plan to develop another modules over the next week. For exampe, module for computing articulation points as the algorithm is almost the same as for bridges.
+
See you in July!
  
Cheers,
 
 
Daniel
 
Daniel
  
== 2nd week report ==
+
(What an embarrasing mistake. By July, I mean June....)
 +
 
 +
== report #2 ==
  
 
Hello everyone,
 
Hello everyone,
Line 51: Line 71:
 
Daniel
 
Daniel
  
== 2nd week report ==
+
== report #1 ==
 +
 
 +
Hello list,
 +
 
 +
I have agreed with my mentor, Wolf, to start working on my GSoC project bit earlier so that I can concentrate more on the exams later. Well, earlier means last Saturday and so this is my first week report. Just a short introduction: I am Daniel, 3rd year at Oxford doing Mathematics and Computer Science and some of you may remember me as the student working on GRASS v.generalize module two years ago. My project this year is about extending GRASS network/vector functionality by writing a couple of modules. I have created a wiki page: http://grass.osgeo.org/wiki/GSoC_Network_Analysis, which contains some useful information such as this email and a link to the abstract.
 +
 
 +
Anyway, after doing boring, but essential, tasks such as downloading and compiling GRASS (I use 6.4 developer branch) I have done more interesting stuff. I wrote a module for computing weakly and strongly connected components. Using this module, I found errors in the standard North Caroline datset. At least, I think that these are errors. For example, if you zoom to [north: 232051.61663403  south: 230521.9965903  east: 640369.10332306  west: 638669.65919416] and let GRASS draw roadsmajor map for you, you get something like this: http://people.ksp.sk/~dano/grass/wcc1.jpg. (colours correspond to different components, which I obtained using my module). Or, the same map, but different location [north: 239329.55684214  south: 238882.80682937  east: 630466.77182694  west: 629997.32746966], and you have another disconnected lines: http://people.ksp.sk/~dano/grass/wcc2.jpg
  
Hi List,
+
Then, I have also written a module for computing bridges(edges whose removal disconnects the graph) in the network and found another, probably error. This time, it is in map "railroads". The location is [north: 195851.98992388  south: 187604.09950596  east: 669691.16599023  west: 663129.724274] and the picture is: http://people.ksp.sk/~dano/grass/railroads.jpg. Note that the lines are not connected at the point the red arrow points at. Also, it seems, but I am not completely sure, that there is something wrong with the red segment the green arrow points at. I think, that the segment is not topologically connected to the network at both ends, although, visually, it seems that it is.
  
This week, I implemented a module that computes the shortest path
+
Finally, here is a random picture from a module for computing bridges: http://people.ksp.sk/~dano/grass/bridges.jpg. (The data is from streets_wake map). The red edges are bridges. Strictly speaking, the blue edges are bridges as well, but they are not the type of bridge you usually look for/consider important. So I wrote another module that can identify such chains hanging on the network and remove them.  
between all pairs of nodes in the graph. You can also specify which
 
pairs you are interested in, so that the module does not have to
 
produce the entire NxN matrix. Also, I started on network flow
 
modules. So far, I have implemented a flow algorithm and a simple
 
module that finds the maximum flow between two given vertices(Well,
 
for debugging purposes, it can handle only the flow between nodes 215
 
and 219, so far....) Anyway, here is couple of pictures:
 
http://people.ksp.sk/~dano/grass/mfu.png,
 
http://people.ksp.sk/~dano/grass/mfu2.png. One cross is source, the
 
other one is sink. Blue edges correspond to low flow, green to medium
 
and red to high flow. I used speed limit as edge capacities. Although
 
it is not the case in the two pictures I posted, the forward and
 
backward capacities of an edge can be different.
 
  
For the next weeks, I plan to revise for my exams. As you may be
+
The code should appear shortly in GRASS addons repository.
aware, I have started two weeks earlier and so I will take a short
 
break now.... Currently, I have no blocking issues.
 
  
See you in July!
+
That is for the last week. I am not currently stuck at anything and I plan to develop another modules over the next week. For exampe, module for computing articulation points as the algorithm is almost the same as for bridges.
  
 +
Cheers,
 
Daniel
 
Daniel
 
(What an embarrasing mistake. By July, I mean June....)
 
  
 
[[Category: GSoC]]
 
[[Category: GSoC]]

Revision as of 13:45, 26 June 2009

Abstract: [1]

report #4

Dear all,

After a break I took because of my exams, I have started working on my GSoC project. I worked mostly on the (v.net.) flow module and related issues. I have extended the module so that it is possible to specify more than one point as the source and sink. Also, the module finds a minimum cut (edges with minimum capacities separating source(s) from sink(s)) in the network. Here is a picture of this: http://people.ksp.sk/~dano/grass/mfmult.png. Red crosses are sources and green ones are sinks (maybe, it is the other way round...) Blue edges correspond to small flow, green to medium flow and red to high flow. And the yellow edges are a minimum cut.

If the capacities of all edges are the same, minimum cut corresponds to the smallest number of edges separating two sets of vertices. By constructing an appropriate graph, it is also possible to find the smallest set of vertices separating sources and sinks. I have written code that does exactly this. In the next picture, orange points separate red points from green points: http://people.ksp.sk/~dano/grass/large.png. The next two pictures show details of the previous one: http://people.ksp.sk/~dano/grass/detail1.png, http://people.ksp.sk/~dano/grass/detail2.png. For the next week, I plan to turn this code into a module as the current version is more useful for debugging than using. Also, I will extend it to handle "node capacities". And I hope I will have time to start working on another new module.

Daniel

report #3

Hi List,

This week, I implemented a module that computes the shortest path between all pairs of nodes in the graph. You can also specify which pairs you are interested in, so that the module does not have to produce the entire NxN matrix. Also, I started on network flow modules. So far, I have implemented a flow algorithm and a simple module that finds the maximum flow between two given vertices(Well, for debugging purposes, it can handle only the flow between nodes 215 and 219, so far....) Anyway, here is couple of pictures: http://people.ksp.sk/~dano/grass/mfu.png, http://people.ksp.sk/~dano/grass/mfu2.png. One cross is source, the other one is sink. Blue edges correspond to low flow, green to medium and red to high flow. I used speed limit as edge capacities. Although it is not the case in the two pictures I posted, the forward and backward capacities of an edge can be different.

For the next weeks, I plan to revise for my exams. As you may be aware, I have started two weeks earlier and so I will take a short break now.... Currently, I have no blocking issues.

See you in July!

Daniel

(What an embarrasing mistake. By July, I mean June....)

report #2

Hello everyone,

While working on the module for computing articulation points, I found a bug in the code calculating bridges. So the first real thing I did this week was some bug fixing. Also, I have updated the module for connected components so that it outputs the computed values in a more useful way (Read: now it can be used for more than just producing nice pictures to the first weak report....). Anyway, everything is kept in a nice little database table. As the first sentence suggests, I have done a module for computing articulation points in the networks. Moreover, I have implemented a module that finds a minimum spanning tree in the graph. This pictures shows both new modules in work: red crosses are articulation points, green edges form a minimum spanning tree (all edges have equal weight) http://people.ksp.sk/~dano/grass/mstap.png. In the following picture, the green edges also form a minimum spanning tree, but this time, the speed limit is used as the weight of an edge. Note that the highway in the centre is not included in the spanning tree: http://people.ksp.sk/~dano/grass/mst.png. The latest version of the code will appear shortly in the add-ons repository.

Currently, I cannot persuade the compiler to compile the library correctly. So far, it does make cause any problems as no code is used by two modules. I will look into this later next week and I will probably start working on the family of modules using max-flows algorithm as well.

Daniel

report #1

Hello list,

I have agreed with my mentor, Wolf, to start working on my GSoC project bit earlier so that I can concentrate more on the exams later. Well, earlier means last Saturday and so this is my first week report. Just a short introduction: I am Daniel, 3rd year at Oxford doing Mathematics and Computer Science and some of you may remember me as the student working on GRASS v.generalize module two years ago. My project this year is about extending GRASS network/vector functionality by writing a couple of modules. I have created a wiki page: http://grass.osgeo.org/wiki/GSoC_Network_Analysis, which contains some useful information such as this email and a link to the abstract.

Anyway, after doing boring, but essential, tasks such as downloading and compiling GRASS (I use 6.4 developer branch) I have done more interesting stuff. I wrote a module for computing weakly and strongly connected components. Using this module, I found errors in the standard North Caroline datset. At least, I think that these are errors. For example, if you zoom to [north: 232051.61663403 south: 230521.9965903 east: 640369.10332306 west: 638669.65919416] and let GRASS draw roadsmajor map for you, you get something like this: http://people.ksp.sk/~dano/grass/wcc1.jpg. (colours correspond to different components, which I obtained using my module). Or, the same map, but different location [north: 239329.55684214 south: 238882.80682937 east: 630466.77182694 west: 629997.32746966], and you have another disconnected lines: http://people.ksp.sk/~dano/grass/wcc2.jpg

Then, I have also written a module for computing bridges(edges whose removal disconnects the graph) in the network and found another, probably error. This time, it is in map "railroads". The location is [north: 195851.98992388 south: 187604.09950596 east: 669691.16599023 west: 663129.724274] and the picture is: http://people.ksp.sk/~dano/grass/railroads.jpg. Note that the lines are not connected at the point the red arrow points at. Also, it seems, but I am not completely sure, that there is something wrong with the red segment the green arrow points at. I think, that the segment is not topologically connected to the network at both ends, although, visually, it seems that it is.

Finally, here is a random picture from a module for computing bridges: http://people.ksp.sk/~dano/grass/bridges.jpg. (The data is from streets_wake map). The red edges are bridges. Strictly speaking, the blue edges are bridges as well, but they are not the type of bridge you usually look for/consider important. So I wrote another module that can identify such chains hanging on the network and remove them.

The code should appear shortly in GRASS addons repository.

That is for the last week. I am not currently stuck at anything and I plan to develop another modules over the next week. For exampe, module for computing articulation points as the algorithm is almost the same as for bridges.

Cheers, Daniel